Basic Information
Locus ID:
gene:TRIDC1BG049390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK13
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 527522872 | 527528622 | - | gene:TRIDC1BG049390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 60,905.66 Da | 41.91 | 83.15 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 74 | 332 | 2.05205E-131 | - |
| Pfam | PF13499 | EF-hand domain pair | 451 | 514 | 8.1E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 75 | 333 | 3.1E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 379 | 439 | 1.2E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 357 | 526 | 1.77E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 340 | 6.2E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 160 | 5.7E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 341 | 6.8E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 342 | 517 | 1.4E-53 | - |
| SMART | SM00054 | efh_1 | 416 | 444 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 380 | 408 | 1.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 452 | 480 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 488 | 516 | 6.8E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 75 | 333 | 8.2E-93 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 448 | 483 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 333 | 46.251408 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 376 | 411 | 16.18713 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 484 | 519 | 14.792358 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 81 | 104 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 461 | 473 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 389 | 401 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 497 | 509 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037472402.1 | calcium-dependent protein kinase 16 [Triticum dicoccoides] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Z1I5 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG049390.