Basic Information
Locus ID:
gene:TRIDC1BG048970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 523764739 | 523772966 | - | gene:TRIDC1BG048970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 166,088.64 Da | 47.19 | 87.79 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1176 | 1502 | 9.9E-69 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 121 | 536 | 1.25E-31 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1126 | 1501 | 1.96E-83 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1075 | 1296 | 3.4E-39 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 116 | 540 | 1.6E-42 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1403 | 1512 | 2.2E-24 | - |
| SMART | SM00119 | hect_3 | 1140 | 1512 | 8.9E-61 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1151 | 1518 | 52.98719 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 887 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 887 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037472291.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum dicoccoides] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Z151 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG048970.