Basic Information
Locus ID:
gene:TRIDC1BG048350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 518197711 | 518201188 | + | gene:TRIDC1BG048350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 27,738.26 Da | 55.14 | 78.66 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 95 | 246 | 2.61507E-67 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 96 | 244 | 3.1E-51 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 90 | 249 | 1.97E-59 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 88 | 253 | 1.7E-64 | IPR016135 |
| SMART | SM00212 | ubc_7 | 94 | 251 | 1.0E-71 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 91 | 251 | 56.179962 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 165 | 180 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 90 | - | - |
| Coils | Coil | Coil | 228 | 248 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59300.1 | ubiquitin carrier protein 7. ubiquitin conjugating enzyme E2 | 0 |
| RefSeq | XP_037418593.1 | ubiquitin-conjugating enzyme E2 7-like [Triticum dicoccoides] | 0 |
| Q42540 | Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 SV=1 | 0 | |
| TrEMBL | W4ZSH7 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG048350.