Basic Information
Locus ID:
gene:TRIDC1BG044810
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 487590615 | 487593223 | - | gene:TRIDC1BG044810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 57,243.89 Da | 48.80 | 93.23 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 15 | 64 | 2.0E-8 | IPR001841 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 243 | 442 | 7.99E-9 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 14 | 72 | 3.89E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 258 | 445 | 1.2E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 10 | 94 | 5.4E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 16 | 64 | 3.4E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 16 | 65 | 12.54829 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 35 | 44 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 526 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21651.1 | zinc ion binding. | 0 |
| RefSeq | XP_037470889.1 | uncharacterized protein LOC119344602 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B5Z0C2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG044810.