Basic Information
Locus ID:
gene:TRIDC1BG043440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase SGR9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 473401330 | 473402416 | - | gene:TRIDC1BG043440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 28,602.03 Da | 56.95 | 99.56 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 200 | 243 | 3.2E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 196 | 248 | 3.53E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 258 | 8.3E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 200 | 242 | 4.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 200 | 243 | 12.489278 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051200770.1 | E3 ubiquitin-protein ligase SGR9, amyloplastic-like [Lolium perenne] | 0 |
| Q9CQ29 | RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YZ78 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG043440.