Basic Information
Locus ID:
gene:TRIDC1BG041920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CDKD-1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 457248868 | 457254777 | + | gene:TRIDC1BG041920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 46,985.63 Da | 40.47 | 83.58 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07841 | STKc_CDK7 | 12 | 306 | 0.0 | IPR037770 |
| Pfam | PF00069 | Protein kinase domain | 15 | 293 | 2.1E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 299 | 8.23E-97 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 309 | 6.6E-68 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 93 | 8.1E-29 | - |
| SMART | SM00220 | serkin_6 | 13 | 293 | 1.8E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 293 | 45.318565 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 131 | 143 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 42 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 364 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73690.1 | cyclin-dependent kinase D1;1. cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. | 0 |
| RefSeq | XP_037469657.1 | cyclin-dependent kinase D-1-like [Triticum dicoccoides] | 0 |
| P29620 | Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKD-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YZN5 | [RNA-polymerase]-subunit kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG041920.