Basic Information
Locus ID:
gene:TRIDC1BG040070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 438475099 | 438483210 | - | gene:TRIDC1BG040070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 142,414.89 Da | 50.28 | 91.11 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 1047 | 1082 | 2.8E-5 | IPR001680 |
| SUPERFAMILY | SSF48371 | ARM repeat | 497 | 815 | 6.86E-13 | IPR016024 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1021 | 1289 | 6.72E-22 | IPR036322 |
| SUPERFAMILY | SSF48371 | ARM repeat | 738 | 970 | 1.78E-8 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 640 | 977 | 2.2E-12 | IPR011989 |
| Gene3D | G3DSA:2.130.10.10 | - | 1168 | 1291 | 2.1E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 996 | 1152 | 4.6E-15 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1043 | 1082 | 5.8E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1001 | 1038 | 36.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1050 | 1083 | 13.549507 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1050 | 1083 | 11.233774 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06880.2 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037468420.1 | putative E3 ubiquitin-protein ligase LIN-1 [Triticum dicoccoides] | 0 |
| C6L7U1 | Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus OX=34305 GN=CERBERUS PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5YYG2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG040070.