Basic Information
Locus ID:
gene:TRIDC1BG036860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 405980515 | 405984054 | + | gene:TRIDC1BG036860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 86,767.96 Da | 56.39 | 84.67 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 716 | 757 | 5.76783E-23 | - |
| CDD | cd01989 | STK_N | 44 | 206 | 7.89432E-31 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 453 | 677 | 1.8E-29 | IPR001245 |
| Pfam | PF04564 | U-box domain | 713 | 783 | 1.8E-17 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 710 | 785 | 1.41E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 425 | 685 | 2.05E-51 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 62 | 168 | 2.43E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 508 | 3.9E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 711 | 787 | 3.9E-27 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 703 | 9.7E-37 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 39 | 169 | 1.5E-8 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 715 | 778 | 5.7E-27 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 691 | 24.485048 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 711 | 785 | 31.527842 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 317 | - | - |
| Coils | Coil | Coil | 354 | 402 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037466832.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5YYF1 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG036860.