Basic Information
Locus ID:
gene:TRIDC1BG036520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 402800464 | 402807669 | - | gene:TRIDC1BG036520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 57,931.06 Da | 51.90 | 82.42 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16450 | mRING-C3HGC3_RFWD3 | 43 | 90 | 1.74322E-18 | - |
| Pfam | PF13639 | Ring finger domain | 43 | 90 | 8.1E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 43 | 97 | 2.52E-13 | - |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 241 | 525 | 2.05E-14 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 204 | 536 | 4.7E-9 | IPR015943 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 179 | 1.5E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 44 | 90 | 0.0073 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 44 | 90 | 11.648357 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| Coils | Coil | Coil | 111 | 145 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037474169.1 | E3 ubiquitin-protein ligase RFWD3-like [Triticum dicoccoides] | 0 |
| A0A974CYQ5 | E3 ubiquitin-protein ligase rfwd3.S OS=Xenopus laevis OX=8355 GN=rfwd3.S PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YX85 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG036520.