Basic Information
Locus ID:
gene:TRIDC1BG036210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Heat shock chaperonin-binding motif.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 399544238 | 399548808 | - | gene:TRIDC1BG036210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 62,785.83 Da | 42.89 | 67.14 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16106 | Ubl_Dsk2p_like | 62 | 133 | 6.99782E-33 | - |
| CDD | cd14399 | UBA_PLICs | 567 | 605 | 2.55391E-16 | - |
| Pfam | PF00627 | UBA/TS-N domain | 567 | 603 | 8.9E-9 | IPR015940 |
| Pfam | PF00240 | Ubiquitin family | 64 | 131 | 2.3E-19 | IPR000626 |
| SUPERFAMILY | SSF46934 | UBA-like | 563 | 605 | 5.62E-14 | IPR009060 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 55 | 148 | 2.16E-22 | IPR029071 |
| Gene3D | G3DSA:1.10.260.100 | - | 220 | 283 | 1.1E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 60 | 144 | 5.0E-20 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 551 | 608 | 1.1E-21 | - |
| SMART | SM00727 | CBM | 421 | 463 | 1.2 | IPR006636 |
| SMART | SM00727 | CBM | 467 | 502 | 5.5E-4 | IPR006636 |
| SMART | SM00213 | ubq_7 | 62 | 133 | 3.6E-17 | IPR000626 |
| SMART | SM00727 | CBM | 230 | 269 | 8.0E-11 | IPR006636 |
| SMART | SM00727 | CBM | 179 | 217 | 10.0 | IPR006636 |
| SMART | SM00165 | uba_6 | 567 | 605 | 1.5E-5 | IPR015940 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 62 | 131 | 19.78216 | IPR000626 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 562 | 606 | 11.920369 | IPR015940 |
| PRINTS | PR00348 | Ubiquitin signature | 114 | 135 | 6.2E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 93 | 113 | 6.2E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 72 | 92 | 6.2E-5 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17200.1 | ubiquitin family protein. | 0 |
| RefSeq | XP_037466436.1 | ubiquitin domain-containing protein DSK2b-like [Triticum dicoccoides] | 0 |
| Q9SII8 | Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana OX=3702 GN=DSK2B PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YX53 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG036210.