Basic Information
Locus ID:
gene:TRIDC1BG035760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 395560224 | 395563175 | - | gene:TRIDC1BG035760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 18,062.32 Da | 53.76 | 72.11 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 10 | 154 | 1.18245E-54 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 10 | 151 | 6.7E-44 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 5 | 157 | 1.17E-50 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 2 | 159 | 1.1E-58 | IPR016135 |
| SMART | SM00212 | ubc_7 | 9 | 159 | 1.7E-63 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 6 | 159 | 42.094788 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 84 | 99 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57870.1 | sumo conjugation enzyme 1. Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name. | 0 |
| RefSeq | XP_037410733.1 | SUMO-conjugating enzyme SCE1-like [Triticum dicoccoides] | 0 |
| Q42551 | SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana OX=3702 GN=SCE1 PE=1 SV=1 | 0 | |
| TrEMBL | W4ZTV7 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG035760.