Basic Information
Locus ID:
gene:TRIDC1BG035550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 392694198 | 392695678 | - | gene:TRIDC1BG035550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 46,081.45 Da | 59.45 | 42.63 | -1.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 111 | 155 | 1.46661E-29 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 112 | 153 | 2.4E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 110 | 166 | 7.28E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 167 | 9.2E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 113 | 153 | 7.8E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 113 | 154 | 13.831801 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 128 | 137 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 331 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19310.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037466040.1 | uncharacterized protein LOC119337899 isoform X1 [Triticum dicoccoides] | 0 |
| O64425 | E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452YRE9 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG035550.