Basic Information
Locus ID:
gene:TRIDC1BG030260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 328953155 | 328956143 | - | gene:TRIDC1BG030260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 50,412.28 Da | 63.80 | 52.16 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16508 | RING-HC_HAKAI_like | 91 | 127 | 5.525E-17 | IPR040380 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 144 | 4.1E-20 | IPR013083 |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. | 146 | 169 | - | IPR013087 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 109 | 118 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 467 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01160.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037462696.1 | E3 ubiquitin-protein ligase HAKAI homolog [Triticum dicoccoides] | 0 |
| Q9LFC0 | E3 ubiquitin-protein ligase HAKAI homolog OS=Arabidopsis thaliana OX=3702 GN=HAKAI PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5ZSJ3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG030260.