Basic Information
Locus ID:
gene:TRIDC1BG028140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 302860846 | 302863461 | + | gene:TRIDC1BG028140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 37,683.15 Da | 42.98 | 101.40 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 21 | 86 | 4.16165E-11 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 93 | 161 | 7.65955E-14 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 170 | 240 | 3.25243E-5 | - |
| Pfam | PF00240 | Ubiquitin family | 93 | 163 | 2.1E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 21 | 87 | 1.3E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 246 | 315 | 1.4E-8 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 240 | 315 | 1.36E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 154 | 243 | 1.13E-11 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 89 | 164 | 2.53E-19 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 7 | 86 | 3.6E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 242 | 330 | 2.0E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 167 | 241 | 7.0E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 19 | 88 | 5.1E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 89 | 166 | 4.8E-20 | - |
| SMART | SM00213 | ubq_7 | 168 | 243 | 1.8 | IPR000626 |
| SMART | SM00213 | ubq_7 | 244 | 315 | 0.16 | IPR000626 |
| SMART | SM00213 | ubq_7 | 19 | 88 | 4.0E-13 | IPR000626 |
| SMART | SM00213 | ubq_7 | 91 | 163 | 3.8E-12 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 91 | 163 | 18.040127 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 244 | 315 | 12.443851 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 88 | 15.94969 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 168 | 240 | 10.396963 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 102 | 122 | 1.8E-8 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 123 | 143 | 1.8E-8 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 144 | 165 | 1.8E-8 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_037450911.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| Q39256 | Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1 | 0 | |
| TrEMBL | A0A452YFA6 | Polyubiquitin OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG028140.