Basic Information
Locus ID:
gene:TRIDC1BG027680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 296016230 | 296020009 | + | gene:TRIDC1BG027680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 93,698.86 Da | 29.08 | 96.64 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 578 | 843 | 5.26446E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 277 | 336 | 8.0E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 401 | 457 | 2.2E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 85 | 107 | 0.92 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 349 | 371 | 2.0 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 577 | 841 | 1.4E-46 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 148 | 463 | 1.33E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 201 | 2.08E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 554 | 841 | 4.92E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 535 | 652 | 2.0E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 71 | 2.1E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 653 | 857 | 4.3E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 492 | 4.0E-96 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 72 | 180 | 5.3E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 155 | 179 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 444 | 469 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 347 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 10 | 34 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 83 | 106 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 420 | 443 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 299 | 322 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 572 | 851 | 39.339882 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 698 | 710 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 578 | 600 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 420 | 433 | 3.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 86 | 99 | 3.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037450671.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5YVA6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG027680.