Basic Information
Locus ID:
gene:TRIDC1BG027660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 295702034 | 295705430 | + | gene:TRIDC1BG027660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 114,320.19 Da | 33.98 | 101.61 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 769 | 1039 | 3.9E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 73 | 5.2E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 187 | 4.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 322 | 380 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 752 | 1042 | 3.42E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 382 | 8.5E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 587 | 671 | 1.77E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 287 | 588 | 8.5E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 850 | 1054 | 4.1E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 271 | 1.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 731 | 848 | 7.2E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 441 | 3.4E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 442 | 685 | 1.8E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 194 | 1.0E-39 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 632 | 655 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 390 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 173 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 537 | 560 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 366 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 28.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 152 | 175 | 7.319219 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1055 | 36.315205 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 894 | 906 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_044393608.1 | MDIS1-interacting receptor like kinase 2-like [Triticum aestivum] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5XY52 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG027660.