Basic Information
Locus ID:
gene:TRIDC1BG027650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 295666725 | 295670030 | - | gene:TRIDC1BG027650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 115,008.66 Da | 35.74 | 102.91 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 76 | 1.7E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 155 | 177 | 0.087 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 772 | 976 | 5.3E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 574 | 1.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 336 | 1.09E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 554 | 674 | 6.24E-19 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 280 | 575 | 2.12E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 747 | 1047 | 2.6E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 850 | 1060 | 2.8E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 245 | 8.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 730 | 848 | 8.8E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 439 | 672 | 2.8E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 116 | 7.7E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 257 | 438 | 4.9E-53 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 370 | 394 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 632 | 655 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 537 | 560 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 369 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 225 | 249 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 153 | 177 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1060 | 36.103195 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 897 | 909 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037450666.1 | LRR receptor-like serine/threonine-protein kinase GSO1 isoform X2 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5YVQ1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG027650.