Basic Information
Locus ID:
gene:TRIDC1BG027580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 295342319 | 295354445 | + | gene:TRIDC1BG027580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 44,595.79 Da | 56.61 | 85.14 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16451 | mRING_PEX12 | 341 | 382 | 8.9126E-20 | - |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region | 21 | 305 | 6.0E-47 | IPR006845 |
| SUPERFAMILY | SSF57850 | RING/U-box | 340 | 391 | 1.26E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 329 | 393 | 6.0E-7 | IPR013083 |
| PIRSF | PIRSF038074 | Peroxin-12 | 1 | 395 | 7.3E-149 | IPR017375 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04460.1 | peroxin-12. RING finger protein involved in peroxisome biogenesis. Also involved in peroxisomal import of nitric oxide synthase. | 0 |
| RefSeq | XP_037450605.1 | peroxisome biogenesis protein 12-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9M841 | Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana OX=3702 GN=PEX12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A452YD84 | Peroxin-12 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG027580.