Basic Information
Locus ID:
gene:TRIDC1BG027100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 287188310 | 287202612 | + | gene:TRIDC1BG027100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 33,029.51 Da | 43.17 | 88.18 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 68 | 104 | 4.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 69 | 112 | 1.09E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 206 | 271 | 5.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 129 | 284 | 1.1E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 62 | 111 | 3.4E-6 | - |
| SMART | SM00256 | fbox_2 | 72 | 113 | 0.0014 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 66 | 100 | 10.133335 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_047071643.1 | F-box/FBD/LRR-repeat protein At1g13570-like isoform X2 [Lolium rigidum] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YVM1 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG027100.