Basic Information
Locus ID:
gene:TRIDC1BG026440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 278806861 | 278807934 | - | gene:TRIDC1BG026440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 38,524.79 Da | 34.24 | 83.95 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 149 | 2.17217E-29 | IPR002083 |
| Pfam | PF00917 | MATH domain | 26 | 146 | 6.9E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 183 | 292 | 2.5E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 293 | 1.53E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 156 | 6.05E-35 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 153 | 2.7E-30 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 357 | 1.9E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 166 | 288 | 2.3E-34 | IPR011333 |
| SMART | SM00061 | math_3 | 21 | 132 | 3.5E-5 | IPR002083 |
| SMART | SM00225 | BTB_4 | 190 | 293 | 2.5E-19 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 190 | 254 | 15.183633 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 149 | 23.229156 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037474122.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YV49 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG026440.