Basic Information
Locus ID:
gene:TRIDC1BG026220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 274266713 | 274268957 | + | gene:TRIDC1BG026220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 34,412.17 Da | 52.30 | 90.76 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 206 | 245 | 7.8E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 197 | 251 | 1.77E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 256 | 2.1E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 207 | 244 | 1.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 207 | 245 | 11.943417 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| Coils | Coil | Coil | 69 | 96 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01520.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037461164.1 | E3 ubiquitin-protein ligase AIRP2-like [Triticum dicoccoides] | 0 |
| Q9M022 | E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5XXV5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG026220.