Basic Information
Locus ID:
gene:TRIDC1BG025800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING finger and CHY zinc finger domain-containing protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 265583154 | 265586357 | - | gene:TRIDC1BG025800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 30,189.20 Da | 48.51 | 53.67 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 195 | 253 | 7.8E-26 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 12 | 93 | 5.4E-18 | IPR008913 |
| Pfam | PF13445 | RING-type zinc-finger | 148 | 188 | 4.1E-6 | IPR027370 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 8 | 82 | 2.88E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 146 | 193 | 3.53E-9 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 84 | 141 | 1.31E-18 | IPR037275 |
| Gene3D | G3DSA:2.20.28.10 | - | 221 | 259 | 3.5E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 132 | 220 | 2.7E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 148 | 190 | 2.7E-5 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 5 | 81 | 24.190212 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 83 | 147 | 34.638058 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 148 | 191 | 11.751628 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_037461381.1 | E3 ubiquitin-protein ligase RZFP34-like isoform X2 [Triticum dicoccoides] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YVG0 | RING finger and CHY zinc finger domain-containing protein 1 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG025800.