Basic Information
Locus ID:
gene:TRIDC1BG025530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 262150688 | 262152802 | + | gene:TRIDC1BG025530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 72,816.09 Da | 33.60 | 94.72 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 353 | 622 | 1.8132E-89 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 264 | 1.00612E-102 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 350 | 618 | 1.7E-47 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 26 | 275 | 1.1E-72 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 639 | 7.15E-80 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 26 | 280 | 9.33E-74 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 425 | 2.6E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 635 | 9.0E-59 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 25 | 266 | 1.5E-64 | - |
| SMART | SM00220 | serkin_6 | 347 | 620 | 1.4E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 620 | 37.827545 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 353 | 376 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037437367.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5YUX6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG025530.