Basic Information
Locus ID:
gene:TRIDC1BG024720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 246195939 | 246212395 | + | gene:TRIDC1BG024720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 110,952.21 Da | 53.13 | 101.93 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 225 | 263 | 1.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 570 | 802 | 5.49E-26 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 754 | 1000 | 1.18E-19 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 244 | 462 | 1.33E-25 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 222 | 253 | 7.85E-5 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 418 | 573 | 7.31E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 466 | 1.9E-14 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 218 | 263 | 1.2E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 467 | 680 | 6.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 781 | 857 | 1.8E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 879 | 1018 | 1.3E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 681 | 780 | 4.2E-7 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 421 | 446 | 2.5E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 812 | 836 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 468 | 493 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 395 | 420 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 577 | 602 | 92.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 223 | 263 | 1.6E-6 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 605 | 627 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 736 | 761 | 250.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 784 | 809 | 100.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33210.1 | F-box family protein. Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem. | 0 |
| RefSeq | XP_037460370.1 | F-box/LRR-repeat protein 15-like [Triticum dicoccoides] | 0 |
| Q9SMY8 | F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana OX=3702 GN=FBL15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A452YA90 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG024720.