Basic Information
Locus ID:
gene:TRIDC1BG023210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
PERK1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 211017862 | 211022913 | + | gene:TRIDC1BG023210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 69,566.27 Da | 74.62 | 60.00 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 291 | 560 | 1.57218E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 290 | 558 | 1.4E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 263 | 558 | 2.6E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 261 | 360 | 1.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 361 | 569 | 1.9E-63 | - |
| SMART | SM00220 | serkin_6 | 285 | 558 | 9.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 285 | 578 | 36.640289 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 291 | 313 | - | IPR017441 |
| PRINTS | PR01217 | Proline rich extensin signature | 35 | 52 | 3.0E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 1 | 17 | 3.0E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 17 | 33 | 3.0E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 57 | 82 | 3.0E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 659 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 102 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_037459210.1 | proline-rich receptor-like protein kinase PERK1 [Triticum dicoccoides] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YVN0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG023210.