Basic Information
Locus ID:
gene:TRIDC1BG019950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 164007365 | 164011214 | + | gene:TRIDC1BG019950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 119,021.49 Da | 35.26 | 107.47 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 82 | 7.0E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 789 | 1055 | 6.7E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 582 | 5.4E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 161 | 183 | 0.76 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 299 | 621 | 7.85E-71 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 393 | 2.38E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 780 | 1059 | 8.75E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 593 | 704 | 2.55E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 202 | 1.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 623 | 708 | 1.6E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 440 | 2.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 336 | 7.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 540 | 622 | 8.9E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 441 | 539 | 3.0E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 862 | 1081 | 9.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 778 | 861 | 4.8E-17 | - |
| SMART | SM00369 | LRR_typ_2 | 521 | 544 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 665 | 689 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 448 | 472 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 328 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 9.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 496 | 520 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 352 | 376 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 424 | 9.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 29.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 785 | 1059 | 4.8E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 569 | 593 | 5.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 545 | 568 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 785 | 1059 | 35.45303 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 547 | 569 | 7.080498 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 908 | 920 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 791 | 815 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 137 | 150 | 6.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 545 | 558 | 6.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1107 | 1128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1094 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56040.2 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037457065.1 | LRR receptor-like serine/threonine-protein kinase [Triticum dicoccoides] | 0 |
| F4K6B8 | Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4 OS=Arabidopsis thaliana OX=3702 GN=RGI4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YU16 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG019950.