Basic Information
Locus ID:
gene:TRIDC1BG019650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 162220588 | 162224310 | + | gene:TRIDC1BG019650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 44,045.82 Da | 43.71 | 77.30 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 35 | 280 | 2.5E-26 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 35 | 294 | 5.0E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 235 | 276 | 0.29 | IPR001680 |
| SMART | SM00320 | WD40_4 | 192 | 232 | 0.16 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56440.1 | homolog of yeast autophagy 18 (ATG18) D. | 0 |
| RefSeq | XP_037456936.1 | autophagy-related protein 18d-like [Triticum dicoccoides] | 0 |
| Q0WPK3 | Autophagy-related protein 18d OS=Arabidopsis thaliana OX=3702 GN=ATG18D PE=2 SV=1 | 0 | |
| TrEMBL | U3Q3D9 | Autophagy-related protein 18a OS=Triticum aestivum OX=4565 GN=ATG18a PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG019650.