Basic Information
Locus ID:
gene:TRIDC1BG016820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Dip2/Utp12 Family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 130592672 | 130610909 | + | gene:TRIDC1BG016820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.40 | 67,312.15 Da | 39.52 | 90.63 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04003 | Dip2/Utp12 Family | 486 | 576 | 3.7E-11 | IPR007148 |
| Pfam | PF00400 | WD domain, G-beta repeat | 11 | 35 | 0.0033 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 190 | 228 | 0.025 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 14 | 234 | 9.81E-35 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 11 | 314 | 1.6E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 106 | 145 | 0.25 | IPR001680 |
| SMART | SM00320 | WD40_4 | 4 | 35 | 6.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 188 | 228 | 0.041 | IPR001680 |
| SMART | SM00320 | WD40_4 | 148 | 185 | 1.2 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 195 | 237 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 14 | 35 | 9.639578 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 622 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11240.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037430663.1 | uncharacterized protein LOC119296366 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6IQ34 | Utp12 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG016820.