Basic Information
Locus ID:
gene:TRIDC1BG015870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 124588819 | 124592578 | - | gene:TRIDC1BG015870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 92,623.34 Da | 41.63 | 87.20 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 521 | 787 | 1.51858E-97 | - |
| CDD | cd01098 | PAN_AP_plant | 346 | 433 | 6.14161E-26 | - |
| Pfam | PF01453 | D-mannose binding lectin | 82 | 187 | 1.7E-24 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 518 | 719 | 3.5E-43 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 361 | 417 | 3.2E-15 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 220 | 328 | 1.2E-30 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 496 | 787 | 3.91E-78 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 69 | 225 | 4.32E-23 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 591 | 797 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 590 | 7.6E-31 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 53 | 159 | 1.1E-9 | IPR036426 |
| SMART | SM00108 | blect_4 | 32 | 161 | 7.0E-7 | IPR001480 |
| SMART | SM00220 | serkin_6 | 515 | 794 | 1.3E-26 | IPR000719 |
| SMART | SM00473 | ntp_6 | 359 | 433 | 5.0E-7 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 36 | 830 | 3.2E-250 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 36 | 157 | 12.696424 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 350 | 434 | 10.307525 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 515 | 787 | 35.566105 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 636 | 648 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 521 | 543 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_045087350.1 | receptor-like serine/threonine-protein kinase SD1-7 [Aegilops tauschii subsp. strangulata] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6WE43 | Receptor-like serine/threonine-protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG015870.