Basic Information
Locus ID:
gene:TRIDC1BG015210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 118716246 | 118725534 | - | gene:TRIDC1BG015210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 53,097.61 Da | 48.94 | 69.60 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 358 | 399 | 0.24 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 240 | 273 | 0.0018 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 437 | 0.028 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 281 | 318 | 8.6E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 104 | 441 | 8.9E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 334 | 464 | 2.1E-13 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 85 | 198 | 1.1E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 199 | 333 | 2.8E-28 | IPR015943 |
| SMART | SM00320 | WD40_4 | 233 | 273 | 1.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 354 | 399 | 0.85 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 129 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 133 | 174 | 69.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 279 | 318 | 2.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 402 | 441 | 0.017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 191 | 230 | 1.2 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 240 | 273 | 10.469233 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 286 | 320 | 10.759232 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 286 | 327 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 240 | 273 | 12.580379 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03020.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037454211.1 | LEC14B homolog [Triticum dicoccoides] | 0 |
| O24467 | LEC14B homolog OS=Prunus armeniaca OX=36596 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YTB2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG015210.