Basic Information
Locus ID:
gene:TRIDC1BG010250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 63062883 | 63067613 | + | gene:TRIDC1BG010250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 128,895.61 Da | 43.33 | 88.19 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 764 | 1152 | 1.199E-105 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 839 | 1154 | 1.6E-77 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1 | 246 | 2.88E-10 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 761 | 1147 | 1.57E-87 | IPR035983 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 900 | 998 | 3.3E-38 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1039 | 1151 | 6.2E-30 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 766 | 1033 | 3.3E-38 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 257 | 8.3E-16 | IPR011989 |
| SMART | SM00119 | hect_3 | 774 | 1154 | 3.3E-90 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 788 | 1154 | 60.474045 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 767 | - | - |
| Coils | Coil | Coil | 382 | 409 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037474033.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum dicoccoides] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A452XSY2 | HECT-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG010250.