Basic Information
Locus ID:
gene:TRIDC1BG010060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 61875346 | 61878299 | - | gene:TRIDC1BG010060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 75,197.20 Da | 37.72 | 89.53 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 307 | 338 | 9.52992E-9 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 308 | 346 | 3.8E-6 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 34 | 80 | 2.1E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 418 | 677 | 7.5E-43 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 307 | 343 | 1.02E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 679 | 1.62E-67 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 259 | 349 | 8.5E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 489 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 685 | 3.5E-51 | - |
| SMART | SM00179 | egfca_6 | 307 | 349 | 1.4E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 310 | 349 | 2.3E-4 | IPR000742 |
| SMART | SM00181 | egf_5 | 259 | 306 | 17.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 415 | 680 | 3.2E-27 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 307 | 344 | 11.186828 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 680 | 34.619125 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 533 | 545 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 307 | 332 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 443 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 323 | 334 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_037450185.1 | wall-associated receptor kinase 2-like [Triticum dicoccoides] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YT45 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG010060.