Basic Information
Locus ID:
gene:TRIDC1BG008570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 53398500 | 53402813 | + | gene:TRIDC1BG008570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 70,808.76 Da | 30.86 | 104.38 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 94 | 135 | 6.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 6 | 28 | 0.72 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 173 | 231 | 1.5E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 343 | 604 | 4.9E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 321 | 606 | 9.31E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 246 | 2.95E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 416 | 1.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 615 | 1.1E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 268 | 8.2E-72 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 51 | 75 | 46.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 340 | 615 | 6.8E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 98 | 121 | 3.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 8.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 28 | 50 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 145 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 340 | 615 | 36.456547 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 30 | 51 | 7.080498 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 77 | 99 | 7.32692 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 346 | 368 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 462 | 474 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 98 | 111 | 1.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 31 | 44 | 1.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037449486.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5YRM9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG008570.