Basic Information
Locus ID:
gene:TRIDC1BG008540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 53244945 | 53248977 | + | gene:TRIDC1BG008540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 47,218.54 Da | 34.60 | 96.85 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 254 | 422 | 9.0E-32 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 13 | 71 | 5.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 143 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 6 | 152 | 5.95E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 231 | 422 | 1.62E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 212 | 327 | 2.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 328 | 424 | 7.1E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 179 | 2.9E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 251 | 425 | 7.9E-9 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 10 | 33 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 34 | 57 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 58 | 82 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 251 | 425 | 29.912504 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 257 | 279 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 373 | 385 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17230.3 | - | 0 |
| RefSeq | XP_037449474.1 | MDIS1-interacting receptor like kinase 2-like [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5YRM8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG008540.