Basic Information
Locus ID:
gene:TRIDC1BG008020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 49729676 | 49732700 | + | gene:TRIDC1BG008020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 75,643.59 Da | 29.53 | 92.62 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 46 | 287 | 2.09138E-97 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 376 | 643 | 1.06202E-87 | - |
| Pfam | PF00139 | Legume lectin domain | 45 | 299 | 1.5E-74 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 371 | 638 | 8.0E-50 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 46 | 306 | 5.6E-71 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 660 | 1.35E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 655 | 8.5E-55 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 44 | 293 | 1.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 446 | 2.9E-33 | - |
| SMART | SM00220 | serkin_6 | 370 | 641 | 1.8E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 628 | 38.675583 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 399 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037449361.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5YSW3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG008020.