Basic Information
Locus ID:
gene:TRIDC1BG004720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 20995871 | 20998955 | - | gene:TRIDC1BG004720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 68,518.10 Da | 41.43 | 89.92 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 239 | 276 | 1.25075E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 350 | 611 | 1.1E-45 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 239 | 281 | 1.4E-6 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 236 | 282 | 3.54E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 615 | 5.6E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 619 | 1.0E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 422 | 4.0E-20 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 197 | 282 | 3.8E-13 | - |
| SMART | SM00179 | egfca_6 | 239 | 282 | 6.1E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 242 | 282 | 0.0028 | IPR000742 |
| SMART | SM00220 | serkin_6 | 348 | 615 | 3.7E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 615 | 36.569618 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 239 | 278 | 12.924648 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 239 | 266 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 257 | 268 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 376 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037433055.1 | wall-associated receptor kinase 4-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YS95 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG004720.