Basic Information
Locus ID:
gene:TRIDC1BG004140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 17530280 | 17551642 | + | gene:TRIDC1BG004140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 88,582.80 Da | 35.44 | 85.31 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 479 | 746 | 2.27546E-87 | - |
| Pfam | PF12819 | Malectin-like domain | 11 | 237 | 2.9E-57 | IPR024788 |
| Pfam | PF13855 | Leucine rich repeat | 291 | 351 | 8.8E-14 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 475 | 744 | 2.4E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 268 | 361 | 3.27E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 453 | 744 | 1.15E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 548 | 3.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 757 | 7.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 251 | 369 | 1.0E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 3.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 337 | 7.1 | IPR003591 |
| SMART | SM00220 | serkin_6 | 473 | 748 | 9.6E-27 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 316 | 339 | 7.627247 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 748 | 35.396496 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 595 | 607 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 501 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 338 | 351 | 4.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 317 | 330 | 4.2E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 448 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51860.2 | - | 0 |
| RefSeq | XP_037473963.1 | probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Triticum dicoccoides] | 0 |
| Q9FZB1 | Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana OX=3702 GN=At1g51880 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YS55 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG004140.