Basic Information
Locus ID:
gene:TRIDC1BG001400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 7203728 | 7221736 | - | gene:TRIDC1BG001400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 81,137.81 Da | 33.66 | 83.64 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 287 | 314 | 1.66105E-7 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 9 | 67 | 5.0E-11 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 407 | 673 | 2.2E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 676 | 1.75E-73 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 285 | 327 | 1.4E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 233 | 327 | 5.0E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 691 | 3.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 481 | 5.1E-29 | - |
| SMART | SM00220 | serkin_6 | 406 | 688 | 1.6E-36 | IPR000719 |
| SMART | SM00179 | egfca_6 | 287 | 327 | 5.8E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 290 | 327 | 1.6 | IPR000742 |
| SMART | SM00179 | egfca_6 | 234 | 286 | 0.77 | IPR001881 |
| SMART | SM00181 | egf_5 | 237 | 286 | 13.0 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 287 | 327 | 10.701576 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 688 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 527 | 539 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 412 | 434 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037445689.1 | wall-associated receptor kinase 3-like [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5YPY3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG001400.