Basic Information
Locus ID:
gene:TRIDC1BG001060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 5390233 | 5393894 | + | gene:TRIDC1BG001060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 108,238.68 Da | 43.46 | 112.33 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 653 | 708 | 5.1E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 192 | 251 | 1.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 59 | 3.5E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 97 | 155 | 3.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 551 | 611 | 7.8E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 825 | 979 | 6.1E-29 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 205 | 516 | 7.22E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 291 | 2.45E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 806 | 985 | 3.55E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 496 | 734 | 1.73E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 416 | 748 | 2.8E-92 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 329 | 8.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 897 | 2.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 898 | 986 | 1.7E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 415 | 9.1E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 187 | 7.1E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 598 | 622 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 0.058 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 358 | 382 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 262 | 286 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 646 | 670 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 357 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 214 | 238 | 8.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 671 | 694 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 213 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 695 | 724 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 820 | 986 | 28.060949 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 336 | 358 | 7.172906 | IPR001611 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 943 | 955 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.2 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037432129.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A453GHB7 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG001060.