Basic Information
Locus ID:
gene:TRIDC1BG000550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 2391853 | 2396176 | + | gene:TRIDC1BG000550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 30,413.45 Da | 36.28 | 110.19 | 0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 230 | 268 | 6.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 213 | 268 | 3.81E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 199 | 268 | 2.1E-16 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 231 | 268 | 10.364846 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47990.1 | SUGAR-INSENSITIVE 3. | 0 |
| RefSeq | XP_044379641.1 | E3 ubiquitin-protein ligase SIS3-like [Triticum aestivum] | 0 |
| Q8GYT9 | E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A452XHL3 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG000550.