Basic Information
Locus ID:
gene:TRIDC1BG000130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 1165257 | 1168620 | + | gene:TRIDC1BG000130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 78,716.75 Da | 45.22 | 90.28 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 331 | 367 | 8.62985E-8 | - |
| Pfam | PF00069 | Protein kinase domain | 443 | 703 | 9.3E-46 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 72 | 4.7E-8 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 331 | 372 | 3.2E-6 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 327 | 375 | 1.67E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 442 | 707 | 9.29E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 713 | 1.3E-51 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 291 | 374 | 6.2E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 514 | 3.8E-20 | - |
| SMART | SM00181 | egf_5 | 334 | 374 | 0.0013 | IPR000742 |
| SMART | SM00179 | egfca_6 | 331 | 374 | 2.6E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 281 | 330 | 190.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 707 | 36.555485 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 331 | 374 | 11.633833 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 446 | 468 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 349 | 360 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 331 | 358 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037445255.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1B0RY67 | SnTox1 sensitivity protein OS=Triticum dicoccoides OX=85692 GN=Snn1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG000130.