Basic Information
Locus ID:
gene:TRIDC1AG063420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 584126759 | 584136600 | + | gene:TRIDC1AG063420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 153,621.70 Da | 40.79 | 82.39 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13968 | Domain of unknown function (DUF4220) | 115 | 521 | 2.3E-78 | IPR025315 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 946 | 1316 | 6.7E-34 | IPR001394 |
| Pfam | PF04578 | Protein of unknown function, DUF594 | 803 | 856 | 3.7E-21 | IPR007658 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 943 | 1318 | 2.35E-61 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 941 | 1320 | 1.3E-62 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 945 | 1319 | 36.34095 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 1250 | 1268 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 946 | 961 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 922 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 922 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 876 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1119 | 1135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1119 | 1142 | - | - |
| Coils | Coil | Coil | 753 | 780 | - | - |
| Coils | Coil | Coil | 900 | 920 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037428865.1 | uncharacterized protein LOC119294721 isoform X1 [Triticum dicoccoides] | 0 |
| A8HAL1 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Danio rerio OX=7955 GN=usp16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6A2E2 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG063420.