Basic Information
Locus ID:
gene:TRIDC1AG063390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 584036147 | 584040959 | - | gene:TRIDC1AG063390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 147,435.52 Da | 41.67 | 83.77 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02667 | Peptidase_C19K | 908 | 1279 | 8.15672E-49 | - |
| Pfam | PF13968 | Domain of unknown function (DUF4220) | 97 | 503 | 2.6E-77 | IPR025315 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 908 | 1278 | 1.9E-35 | IPR001394 |
| Pfam | PF04578 | Protein of unknown function, DUF594 | 774 | 827 | 1.3E-20 | IPR007658 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 906 | 1280 | 2.35E-61 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 903 | 1282 | 3.4E-63 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 907 | 1281 | 36.197895 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 908 | 923 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1083 | 1097 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 867 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1083 | 1145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1113 | 1129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 866 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1098 | 1112 | - | - |
| Coils | Coil | Coil | 723 | 757 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037428856.1 | uncharacterized protein LOC119294713 [Triticum dicoccoides] | 0 |
| A8HAL1 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Danio rerio OX=7955 GN=usp16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6A2E2 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG063390.