Basic Information
Locus ID:
gene:TRIDC1AG062640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 580178016 | 580182969 | + | gene:TRIDC1AG062640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 55,094.53 Da | 41.62 | 74.86 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 452 | 480 | 0.0088 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 305 | 338 | 0.18 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 396 | 435 | 1.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 263 | 301 | 0.0027 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 202 | 480 | 6.23E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 77 | 346 | 3.3E-26 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 348 | 495 | 6.0E-28 | IPR015943 |
| SMART | SM00320 | WD40_4 | 346 | 385 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 194 | 235 | 210.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 395 | 435 | 3.4E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 259 | 301 | 2.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 440 | 480 | 3.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 342 | 4.8E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 402 | 440 | 12.525585 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 268 | 310 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 268 | 306 | 9.836508 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 402 | 444 | 15.420926 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 288 | 302 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 422 | 436 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 222 | 236 | 1.6E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 288 | 302 | 1.6E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 422 | 436 | 1.6E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18905.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037428335.1 | periodic tryptophan protein 1 homolog [Triticum dicoccoides] | 0 |
| Q9P775 | Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y719 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG062640.