Basic Information
Locus ID:
gene:TRIDC1AG061660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 575969503 | 575978316 | - | gene:TRIDC1AG061660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 59,614.14 Da | 57.68 | 69.21 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 417 | 475 | 5.3512E-7 | - |
| Pfam | PF00240 | Ubiquitin family | 264 | 333 | 5.7E-22 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 338 | 407 | 1.5E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 415 | 475 | 7.6E-8 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 335 | 408 | 1.59E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 255 | 333 | 3.45E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 416 | 477 | 1.7E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 254 | 334 | 1.0E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 335 | 415 | 2.6E-20 | - |
| SMART | SM00213 | ubq_7 | 262 | 334 | 9.5E-17 | IPR000626 |
| SMART | SM00213 | ubq_7 | 336 | 407 | 1.8E-13 | IPR000626 |
| SMART | SM00213 | ubq_7 | 415 | 483 | 2.0 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 262 | 334 | 19.586182 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 336 | 407 | 17.691721 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 294 | 314 | 2.0E-15 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 315 | 336 | 2.0E-15 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 273 | 293 | 2.0E-15 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 220 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037479369.1 | uncharacterized protein LOC119356507 [Triticum dicoccoides] | 0 |
| P0CG73 | Polyubiquitin OS=Candida albicans OX=5476 GN=UBI1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6A3C7 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG061660.