Basic Information
Locus ID:
gene:TRIDC1AG060430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 571434761 | 571443756 | - | gene:TRIDC1AG060430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 126,898.05 Da | 50.21 | 69.22 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 920 | 955 | 0.02 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1007 | 1039 | 0.022 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 639 | 8.84E-14 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 834 | 1144 | 4.93E-49 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 807 | 1147 | 5.4E-125 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 350 | 634 | 1.1E-14 | - |
| SMART | SM00320 | WD40_4 | 915 | 955 | 2.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 873 | 912 | 0.062 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1106 | 1145 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1050 | 1089 | 67.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 824 | 862 | 5.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1001 | 1039 | 1.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 958 | 997 | 0.35 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 897 | 921 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 922 | 964 | 11.043142 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1008 | 1041 | 11.978851 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1008 | 1041 | 9.99469 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 942 | 956 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1026 | 1040 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 899 | 913 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 942 | 956 | 6.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 899 | 913 | 6.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1026 | 1040 | 6.0E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 102 | - | - |
| Coils | Coil | Coil | 670 | 697 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_037427440.1 | protein SUPPRESSOR OF PHYA-105 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7P3I9 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG060430.