Basic Information
Locus ID:
gene:TRIDC1AG059290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 565310744 | 565317019 | + | gene:TRIDC1AG059290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 62,306.58 Da | 45.16 | 74.49 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07859 | STKc_TDY_MAPK | 35 | 372 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 36 | 327 | 7.7E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 331 | 2.97E-93 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 51 | 373 | 5.9E-137 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 122 | 350 | 5.9E-137 | - |
| SMART | SM00220 | serkin_6 | 36 | 327 | 5.7E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 327 | 45.007614 | IPR000719 |
| ProSitePatterns | PS01351 | MAP kinase signature. | 71 | 174 | - | IPR003527 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 66 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 441 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42880.2 | - | 0 |
| RefSeq | XP_037426978.1 | mitogen-activated protein kinase 7-like isoform X1 [Triticum dicoccoides] | 0 |
| Q67C40 | Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Y6A9 | mitogen-activated protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG059290.