HalophFGD

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Basic Information
Locus ID: gene:TRIDC1AG058850
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
1A 563327278 563328501 - gene:TRIDC1AG058850
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.05 34,437.13 Da 35.74 84.57 -0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 47 173 2.30681E-27 IPR002083
Pfam PF00917 MATH domain 55 170 8.1E-7 IPR002083
Pfam PF00651 BTB/POZ domain 196 271 1.4E-16 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 46 176 9.65E-32 -
SUPERFAMILY SSF54695 POZ domain 182 271 1.45E-22 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 46 174 3.4E-28 IPR008974
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 175 309 7.5E-27 IPR011333
SMART SM00225 BTB_4 205 304 1.2E-7 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 45 173 19.52158 IPR002083
ProSiteProfiles PS50097 BTB domain profile. 205 274 15.783411 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G39760.2 BTB/POZ/MATH-domains containing protein. 0
RefSeq XP_044421641.1 BTB/POZ and MATH domain-containing protein 3-like [Triticum aestivum] 0
Swiss-Prot O22286 BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 0
TrEMBL A0A3B5Z486 BTB/POZ and MATH domain-containing protein 1-like OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC1AG058850.

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