Basic Information
Locus ID:
gene:TRIDC1AG057680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 557781554 | 557785485 | - | gene:TRIDC1AG057680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 62,222.26 Da | 33.64 | 100.27 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 239 | 498 | 2.8E-40 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 74 | 133 | 1.1E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 2 | 61 | 1.5E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 212 | 540 | 8.63E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 158 | 9.36E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 320 | 557 | 1.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 177 | 3.4E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 218 | 319 | 2.2E-22 | - |
| SMART | SM00220 | serkin_6 | 238 | 548 | 5.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 238 | 548 | 35.933586 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 368 | 380 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 244 | 267 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044951922.1 | receptor kinase-like protein Xa21 [Hordeum vulgare subsp. vulgare] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y5Z3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG057680.