Basic Information
Locus ID:
gene:TRIDC1AG056500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 553650065 | 553651530 | - | gene:TRIDC1AG056500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 31,662.80 Da | 29.87 | 84.23 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 153 | 283 | 1.94757E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 2 | 85 | 4.3E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 1 | 84 | 6.67E-19 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 153 | 285 | 4.91E-26 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 88 | 155 | 7.1E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 87 | 2.5E-23 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 156 | 286 | 1.9E-24 | IPR008974 |
| SMART | SM00225 | BTB_4 | 1 | 86 | 2.2E-6 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 152 | 282 | 14.944638 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 51 | 11.709058 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037478305.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2CMR5 | MATH domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g14033v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG056500.